BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038F08LP1|AL430577
(894 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1705 0.0
>3x_Contig1795
Length = 38452
Score = 1705 bits (850), Expect = 0.0
Identities = 875/894 (97%)
Strand = Plus / Minus
Query: 1 gatctttcaacgaacgaattgtgtttactattgaatataaaattgagaaacctaatatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24187 gatctttcaacgaacgaattgtgtttactattgaatataaaattgagaaacctaatatat 24128
Query: 61 cgttttgattgttcatacacaacaatttaagggtaaagcaaagtggttaattttgtgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24127 cgttttgattgttcatacacaacaatttaagggtaaagcaaagtggttaattttgtgtat 24068
Query: 121 tagagagtcaagatcacattgtgtctgcygcyaatcgatactatgagcataccatatgat 180
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 24067 tagagagtcaagatcacattgtgtctgctgctaatcgatactatgagcataccatatgat 24008
Query: 181 gaggaaactcagccgttagtcccyagaggggtgacaaggcgaagggataattcggtggcy 240
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 24007 gaggaaactcagccgttagtccctagaggggtgacaaggcgaagggataattcggtggct 23948
Query: 241 agttttttggcacggggacgaagtaatactataaacagtttaaaaagtggcttcgaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23947 agttttttggcacggggacgaagtaatactataaacagtttaaaaagtggcttcgaaaca 23888
Query: 301 gtgaagaaacataaaaatgagttctggttacyaataattggaagtttggtgttatatctt 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 23887 gtgaagaaacataaaaatgagttctggttactaataattggaagtttggtgttatatctt 23828
Query: 361 gggttcactttggcatttttaccgagaacgtcactttcaagggacttcagacgattacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23827 gggttcactttggcatttttaccgagaacgtcactttcaagggacttcagacgattacac 23768
Query: 421 ttcagccagttaacaaaatctgaggcattcagaatttatgtcgagactctcatgaaggaa 480
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23767 ttcagcaagttaacaaaatctgaggcattcagaatttatgtcgagactctcatgaaggaa 23708
Query: 481 aacaaatgtcaggaccatttgagccactatacttcccacattcattgggctggtgatgct 540
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 23707 aacaaatgtcaggaccatttgagcaactatacttcccacattcattgggctggtgatgct 23648
Query: 541 catgcgttggagtatacyatcaatgaattaagcatgcytggttttacacctaagcttgaa 600
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 23647 catgcgttggagtatactatcaatgaattaagcatgcttggttttacacctaagcttgaa 23588
Query: 601 gagtatcacacttkgttkaatkaaccagtkaaaacgkaagttacactctkggatcakaat 660
||||||||||||| ||| ||| ||||||| |||||| |||| ||||||| |||||| |||
Sbjct: 23587 gagtatcacacttggttgaatgaaccagtgaaaacggaagtgacactctgggatcagaat 23528
Query: 661 catcttttatacaacgcaagtwtgacggaagattatatttctgaaggcgaagataatgat 720
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 23527 catcttttatacaacgcaagtatgacggaagattatatttctgaaggcgaagataatgat 23468
Query: 721 tcgttcaaaaaggtttttgggtttcatggcttttctgcaaatggtacagtaagatcggaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23467 tcgttcaaaaaggtttttgggtttcatggcttttctgcaaatggtacagtaagatcggaa 23408
Query: 781 tatgtttactgcaactatgggactatcgaggactatgaacaccttctttcccataacgtc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23407 tatgtttactgcaactatgggactatcgaggactatgaacaccttctttcccataacgtc 23348
Query: 841 aaacttgagggtaaaatacacgttattaggtatggggctataatgaaagkaatt 894
||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 23347 aaacttgagggtaaaatacacgttattaggtatggggctataatgaaaggaatt 23294
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5277
Number of Sequences: 1807
Number of extensions: 5277
Number of successful extensions: 19
Number of sequences better than 1.0e-20: 1
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)